论文标题

使用卷积神经网络对临床CT图像中强度校准幻象的自动分割

Automated segmentation of an intensity calibration phantom in clinical CT images using a convolutional neural network

论文作者

Uemura, Keisuke, Otake, Yoshito, Takao, Masaki, Soufi, Mazen, Kawasaki, Akihiro, Sugano, Nobuhiko, Sato, Yoshinobu

论文摘要

目的:应用卷积神经网络(CNN)开发一个系统,该系统在计算机断层扫描(CT)图像中分离强度校准幻象区域,并在大型队列中测试系统以评估其稳健性。方法:在此使用了强度校准幻影(B-MAS200,京都Kagaku,日本,日本)共有1040例(来自两个机构的520例)。通过手动将幻影区域分割为40例(每个情况20例)来创建一个培训数据集。通过骰子系数和平均对称表面距离(ASD)评估CNN模型的分割精度,通过4倍的交叉验证。此外,比较了手动分割区域和自动分割区域之间的放射强度值的绝对差异(在Hounsfield单位:HU中)。该系统已在其余1000例中进行了测试。对于每个机构,将线性回归应用于计算放射强度与幻影密度之间相关性的系数。结果:训练后,中位骰子系数为0.977,中位ASD为0.116 mm。当比较手动分割和自动分割之间的分段区域时,中值的绝对差为0.114 HU。对于测试用例,一个机构的中值相关系数为0.9998,另一个机构的相关系数为0.9999,最低值为0.9863。结论:CNN模型以极好的精度成功地分割了CT图像中校准幻影区域,并且发现自动化方法至少等效于常规手动方法。未来的研究应通过自动分割骨骼中感兴趣的区域来整合系统,以便可以从CT图像中自动量化骨矿物质密度。

Purpose: To apply a convolutional neural network (CNN) to develop a system that segments intensity calibration phantom regions in computed tomography (CT) images, and to test the system in a large cohort to evaluate its robustness. Methods: A total of 1040 cases (520 cases each from two institutions), in which an intensity calibration phantom (B-MAS200, Kyoto Kagaku, Kyoto, Japan) was used, were included herein. A training dataset was created by manually segmenting the regions of the phantom for 40 cases (20 cases each). Segmentation accuracy of the CNN model was assessed with the Dice coefficient and the average symmetric surface distance (ASD) through the 4-fold cross validation. Further, absolute differences of radiodensity values (in Hounsfield units: HU) were compared between manually segmented regions and automatically segmented regions. The system was tested on the remaining 1000 cases. For each institution, linear regression was applied to calculate coefficients for the correlation between radiodensity and the densities of the phantom. Results: After training, the median Dice coefficient was 0.977, and the median ASD was 0.116 mm. When segmented regions were compared between manual segmentation and automated segmentation, the median absolute difference was 0.114 HU. For the test cases, the median correlation coefficient was 0.9998 for one institution and was 0.9999 for the other, with a minimum value of 0.9863. Conclusions: The CNN model successfully segmented the calibration phantom's regions in the CT images with excellent accuracy, and the automated method was found to be at least equivalent to the conventional manual method. Future study should integrate the system by automatically segmenting the region of interest in bones such that the bone mineral density can be fully automatically quantified from CT images.

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