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Due to the nature of most postgraduate theses in control engineering and their similarities to industrial and software engineering projects, invoking novel project control techniques could be effective. In recent decades, agile techniques have attracted popularity thanks to their attributes in delivering successful projects. Hence exploiting those methods in education and thesis supervision of engineering topics can facilitate the process. On the other hand, because of the limitations imposed by the CoVid19 pandemic, the integration of well-established online tools in collaborative education is noteworthy. This paper proposes an application of the agile project management method for the supervision of postgraduate students' theses in the general field of engineering. The study extends a Scrum technique combined with approved systems engineering and team working tools such as Jira Software, Microsoft Teams, and Git version control (Github website). A custom designed V-model to nail an outstanding thesis is presented. The overall blended method is beneficial to provide feedback and self-assessment aid for the students and the supervisors. Employing this technique has shown promising progress in easing the supervision of students whilst helping them to manage their projects.